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A list of all the posts and pages found on the site. For you robots out there, there is an XML version available for digesting as well.
Pages
About me
About me
Posts
Tumor-Normal Mutation Analysis Pipeline Using GATK Mutect2
Published:
I recently completed a project involving tumor-normal mutation analysis, and I wanted to share my experience with using the GATK Mutect2 pipeline for somatic mutation detection. This was a fantastic learning opportunity that allowed me to explore the intricacies of cancer genomics and the power of next-generation sequencing (NGS). Through this process, I gained a better understanding of how to identify somatic mutations like single nucleotide variants (SNVs) and small insertions/deletions (indels) by comparing tumor and normal samples.
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
publications
Paper Title Number 2
Published in Journal 1, 2010
This paper is about the number 2. The number 3 is left for future work.
Recommended citation: Your Name, You. (2010). "Paper Title Number 2." Journal 1. 1(2).
Download Paper | Download Slides
Paper Title Number 3
Published in Journal 1, 2015
This paper is about the number 3. The number 4 is left for future work.
Recommended citation: Your Name, You. (2015). "Paper Title Number 3." Journal 1. 1(3).
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Spatio-temporal variation of the microbiome and resistome repertoire along an anthropogenically dynamic segment of the Ganges River, India Permalink
Published in Science of The Total Environment, 2023
title: “Campus Sewage Water Surveillance based dynamics and infection trends of SARS-CoV-2 variants during third wave of COVID-19 in Pune, India” collection: publications permalink: /publication/2023-campus-sewage-surveillance date: 2023-05-01 venue: ‘Cold Spring Harbor Laboratory’ link: ‘https://www.cshl.edu’ —
Paper Title Number 4
Published in GitHub Journal of Bugs, 2024
This paper is about fixing template issue #693.
Recommended citation: Your Name, You. (2024). "Paper Title Number 3." GitHub Journal of Bugs. 1(3).
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talks
Talk 1 on Relevant Topic in Your Field
Published:
This is a description of your talk, which is a markdown file that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.